University of Southern California
USC Norris Comprehensive Cancer Center
If you are a patient, please contact The Doctors of USC at 800-USC-CARE.

NCI Cohort Consortium - Taqman Genotyping Call Key

Click on Assay ID for SDS plots
Each assay was tested on a multiethnic panel of 92 subjects + 4 No Template Controls
Average concordance of Sequenom V. Taqman is 99.3%
Haplotype tagging SNPs for Whites in the MEC with haplotype frequency > =5% & R2h>0.7

Additional information can be found at http://cgf.nci.nih.gov/cohort.cfm

Choose gene:

Assay IDSNP IDReporterReporter SequenceForward SNPUSCCAMBRIDGEHARVARDIARCNCIU HAWAIIPercent ConcordanceComments
ACTHR_001c rs12454030 VIC
FAM
CAACTTTACTGAATTTG
AACTTTACAGAATTTG
A
T
ViewViewViewViewViewView%
ACTHR_002c rs1940898 VIC
FAM
CAGAGGAAGATACTGGCT
CAGAGGAAGATAGTGGCT
C
G
ViewViewViewViewViewView%
ACTHR_003c rs1940897 VIC
FAM
CAACCGGGATAGCC
TCAACCAGGATAGCC
C
T
ViewViewViewViewViewView%
ACTHR_004c G2-P-6-G2P6 VIC
FAM
CCTTCACCCCAGAGAC
CCTTCACTCCAGAGAC
G
A
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ACTHR_005c rs3760534 VIC
FAM
CCTTCCCACTTCCCAC
CCTTCCCACCTCCCAC
A
G
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ACTHR_006c rs1941091 VIC
FAM
CATGCCCACGCTGC
ATGCCCGCGCTGC
A
G
ViewViewViewViewViewView%
AR_001c rs962458 VIC
FAM
TGTGCGATGTTTTC
ATGTGCAATGTTTTC
G
A
ViewViewViewViewViewView%
AR_002c rs6152 VIC
FAM
CCCGAGGCTTCCCT
CCGAGGCCTCCCT
A
G
ViewViewViewViewViewView%
AR_003c rs1204038 VIC
FAM
CAGACAGGAAAGGGAA
AGACAGGGAAGGGAA
A
G
ViewViewViewViewViewView%
AR_004c rs2361634 VIC
FAM
CTCCCGCATATAGACA
CTCCCGCATGTAGACA
A
G
ViewViewViewViewViewView%
AR_005c rs1337080 VIC
FAM
AACTATAAATTACATATGGAAAAG
TATAAATTACATGTGGAAAAG
A
G
ViewViewViewViewViewView%
AR_006c rs1337082 VIC
FAM
CCAAGGTTTAGAAAGGTTA
CAAGGTTTAGGAAGGTTA
A
G
ViewViewViewViewViewView%
COMT_101c rs4485648 VIC
FAM
TACCGCCCCTGGCCT
CTACCGCCCCTAGCCT
C
T
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COMT_102c rs6518592 VIC
FAM
ACCGTTGCACCGCT
ACCGTTGCCCCGCT
A
C
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COMT_103c rs174674 VIC
FAM
AAAAAAGAAATAAAGAAATGC
AAAGAAATAAGGAAATGC
A
G
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COMT_104c rs7290221 VIC
FAM
CACCACCATGCCTG
CACCACGATGCCTG
C
G
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COMT_105c rs4646312 VIC
FAM
CAAGGGCTGGTTTAC
CAAGGGCTAGTTTAC
C
T
View View ViewView%
COMT_106c rs4633 VIC
FAM
TGAACCACGTGCTGC
TGAACCATGTGCTGCA
C
T
View View ViewView%
COMT_107c rs6267(A72S) VIC
FAM
CCCGGGAACGCACA
CCGGGAACTCACA
G
T
View View ViewView%
COMT_108c rs4680 (V158M) VIC
FAM
TTCGCTGGCATGAAG
TCGCTGGCGTGAAG
A
G
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COMT_109c rs9332377 VIC
FAM
CAGGCCTATGAGGGAGA
AGGCCTATGAAGGAGA
C
T
View View ViewView%
COMT_110c rs165728 VIC
FAM
TGTAGGTGGGCAGAAA
TGTAGGTGGACAGAAA
C
T
View   ViewView%
COMT_111c rs165849 VIC
FAM
CAGGCAGCAGAGAC
AGGCAGCGGAGAC
A
G
View View ViewView%
COMT_112c rs1110478 VIC
FAM
CAGTGCCTATTGGGCTG
CAGTGCCTATTGAGCTG
C
T
View View ViewView%
CYP11A_003c rs3825944 VIC
FAM
CTCCATCTTTCTGCTGCC
CTCCATCTTTTTGCTGCC
G
A
View View ViewView%
CYP11A_006c cv26770216 VIC
FAM
AACCCACCCATGTCC
AAAACCCACTCATGTCC
C
T
View View ViewView%
CYP11A_008c rs4555110 VIC
FAM
ACAGCAGGTAAGTCT
ACAGCAGGTGAGTCT
A
G
View View ViewView%
CYP11A_011c cv26012751 VIC
FAM
CCGAGGAATTATGTCTGAC
CCGAGGAATTATCTCTGAC
C
G
View View ViewView%
CYP17_001c rs619824 VIC
FAM
TGGTGAAAGATGAAAC
TGGTGAAAGCTGAAAC
A
C
ViewViewViewViewViewView%
CYP17_002c rs284849 VIC
FAM
TCTGCAAAGCTTG
CACCTCTGCCAAGC
T
G
ViewViewViewViewViewView%
CYP17_003c rs743572 VIC
FAM

A
G
ViewViewViewViewViewView% ABI Assay On Demand
CYP17_011c rs4919687 VIC
FAM
AGGTACCTGCCTTCT
CAGGTACTTGCCTTC
G
A
ViewViewViewViewViewView%
Cyp17_017c rs7097872 VIC
FAM
CCTGACTGACACGCCAA
CCTGACTGACATGCCAA
C
T
ViewViewViewViewViewView%
CYP17_019c rs4919682 VIC
FAM
CCGAGCCCCACCTC
CGAGCCCCGCCTC
T
C
ViewViewViewViewViewView%
CYP17_020c rs10883782 VIC
FAM
ACATAGTAAATGCCATTATGT
CATAGTAAATGCCATCATGT
A
G
ViewViewViewViewViewView%
CYP17_023c rs6892 VIC
FAM
CCCTTTGTCAGTTATTGTGA
CCTTTGTCAGTTGTTGTGA
A
G
ViewViewViewViewViewView%
CYP17_024c rs2486758 VIC
FAM
TTGCAGCATGGAAAG
TTTTGCAACATGGAAAG
C
T
ViewViewViewViewViewView%
CYP19_001c rs2446405 VIC
FAM
TGGCTCAAATTATT
TGGCTCATATTATTGC
T
A
ViewViewViewViewViewView%
CYP19_002c rs2445765 VIC
FAM
ATGCACTGTCAAAGC
ATGCAGTGTCAAAGC
C
G
ViewViewViewViewViewView%
CYP19_003c rs2470144 VIC
FAM
CCTCCATCAGTGGC
TCCCTCCGTCAGTGG
T
C
ViewViewViewViewViewView%
CYP19_004c rs1004984 VIC
FAM
TCCCCCAACAGTAGG
CTCCCCTAACAGTAGG
G
A
ViewViewViewViewViewView%
CYP19_005c rs1902584 VIC
FAM
TTCTTATGAACAATTTC
ATTCTTATGAACATTTTC
A
T
ViewViewViewViewViewView%
CYP19_006c CV1664178 VIC
FAM
TCCCACATTTACTTCC
CCCACCTTTACTTCC
A
C
ViewViewViewViewViewView%
CYP19_007c rs2445759 VIC
FAM
TGAAGAGGTACATATTC
ATGAAGAGTTACATATTC
G
T
ViewViewViewViewViewView%
CYP19_010c rs936306 VIC
FAM
CAGGTCTGCTTGGAA
AGGTCTGTTTGGAATT
C
T
ViewViewViewViewViewView%
CYP19_011c CV11484670 VIC
FAM
TGTGAACATGATTGTC
TGTGTGAACGTGATTG
A
G
ViewViewViewViewViewView%
CYP19_013c rs749292 VIC
FAM
CGGAGTCAAGGATT
CGGAGTCGAGGATT
A
G
ViewViewViewViewViewView%
CYP19_014c rs1008805 VIC
FAM
TCCTGCGTCCTGC
TCCTGTGTCCTGCC
G
A
ViewViewViewViewViewView%
CYP19_018c rs4646 VIC
FAM
CAGATGACAAATAGC
AGATGACCAATAGCAC
A
C
ViewViewViewViewViewView%
CYP19_023c rs700519 VIC
FAM
ATCCTGCATCTTTT
ATCCTGCGTCTTTT
A
G
ViewViewViewViewViewView%
CYP19_025c rs10046 VIC
FAM
TGGTCAGTACCTACTCT
AGTACCCACTCTGGAG
A
G
ViewViewViewViewViewView%
CYP19_026c CV8234947 VIC
FAM
CAAAACCTCAATAAAC
CAAAACCTCGATAAAC
A
G
      % OMIT more info
CYP19_027c rs727479 VIC
FAM
ACTTTGTTTCCGCCATGC
CACTTTGTTTCCTCCATGC
C
A
ViewViewViewViewViewView%
CYP19_028c rs2414096 VIC
FAM
TTCTTAAATGGAGTCTTTT
CTTAAACGGAGTCTTT
A
G
ViewViewViewViewViewView%
CYP19_031c IVS7+26G-A VIC
FAM
TGGCATGGGAATTA
TGGCATGGAAATT
G
A
ViewViewViewViewViewView%
CYP19_032c CV8234971 VIC
FAM
CTCCAGCACCTGAGC
CCAGCGCCTGAGC
A
G
ViewViewViewViewViewView%
CYP19_033c CYP19_99 VIC
FAM
CTCAAGAAGAGCGTGTTAG
TCAAGAAGAGCATGTTAG
G
A
ViewViewViewViewViewView%
CYP19_034c rs2445762 VIC
FAM
ATGGGCATATAGGGATGTAG
TGGGCATATAGAGATGTAG
C
T
ViewViewViewViewViewView%
CYP19_036c rs3751591 VIC
FAM
CCCTCCTTTCAATAAGAG
CCCTCCTTTCAGTAAGAG
A
G
ViewViewViewViewViewView%
CYP1A1_101c rs2198843 VIC
FAM
CCCTGCAGAGTGGT
ACCCTGCACAGTGGT
C
G
View View ViewView%
CYP1A1_102c Poly-0018028 (D440Y) VIC
FAM
TTAACACCTTGTTGATAGC
ACACCTTGTCGATAGC
T
C
View View ViewView%
CYP1A1_103c Poly-0014111(I78T) VIC
FAM
TGGAGCCAATTCGGAT
TGGAGCCAGTTCGGAT
A
G
View View ViewView%
CYP1A1_104c rs4646422 (G45D) VIC
FAM
AGAGGCCAGCCCCAT
AGAGGCCAGTCCCAT
C
T
View View ViewView%
CYP1A1_105c rs2606345 VIC
FAM
TCAGGGTGACAGATT
ATCAGGTTGACAGATT
C
A
View View ViewView%
CYP1A1_106c rs2470893 VIC
FAM
TCGCCAGCGCCTC
TCGCCAGCACCTC
C
T
View View ViewView%
CYP1A1_107c rs12441817 VIC
FAM
AAAGCATCTAGCGCTCTA
AAAGCATCTAGTGCTCTA
C
T
View View ViewView%
CYP1A1_108c rs2472297 VIC
FAM
TTATATGTAAAGAGGCATTACT
TTTATATGTAAAGAGACATTACT
C
T
View View ViewView%
CYP1A1_109c rs2472299 VIC
FAM
AGGCATTCAGAATAA
AGGCATTCAGAACAA
A
G
View View ViewView%
CYP1A2_101c rs11072508 VIC
FAM
TCACAGCGAGCTTT
TCACAGCAAGCTTT
C
T
View View ViewView%
CYP1A2_102c rs4886410 VIC
FAM
TGACAAAGGCCCCTCC
ACAAAGGGCCCTCC
G
C
View View ViewView%
CYP1B1_007c rs1800440 VIC
FAM
CTCATCAACAAGGAC
TCATCAGCAAGGAC
T
C
ViewViewViewViewViewView%
CYP1B1_018c rs10175368 VIC
FAM
TATCTTAGAGTCAATGATGC
CTTAGAGTCGATGATGC
T
C
ViewViewViewViewViewView%
CYP1B1_027c rs162556 VIC
FAM
CCCTTATCGGTTATGGC
CCCTTATCAGTTATGGC
G
A
ViewViewViewViewViewView%
CYP1B1_031c rs162562 VIC
FAM
TACTGAATGAAGAAGTATTT
TGAATGAAGCAGTATTT
T
G
ViewViewViewViewViewView%
CYP1B1_042c rs162557 VIC
FAM
TCTGAAGAGAATCTG
TCTGAAAAGAATCTG
G
A
ViewViewViewViewViewView%
CYP1B1_059c rs9341266 VIC
FAM
ATTTTCCCACTCATTCTG
ATTTTCCCACTTATTCTG
G
A
ViewViewViewViewViewView%
Cyp1B1_FLJ32954_01c rs163077 VIC
FAM
CCTCACCAGCTTT
CCTCATCAGCTTTT
C
T
View View ViewView%
CYP1B1_FLJ32954_02c rs163086 VIC
FAM
CCAGTGCTCACGGG
CAGTGTTCACGGGCT
C
T
ViewViewView ViewView%
ESR2_001c rs3020450 VIC
FAM
CTCTCCATAGAAATC
TCTCCGTAGAAATC
T
C
ViewViewViewViewViewView%
ESR2_003c rs1256031 VIC
FAM
CACAATCTCCTTGTTTT
CACAATCCCCTTGTTT
A
G
ViewViewViewViewViewView%
ESR2_004c rs1256041 VIC
FAM
TCCCCACAAGTTCA
ATCCCCACGAGTTCA
A
G
      % nearby SNP, sequencing in progress
ESR2_006c rs1256049 VIC
FAM
AAGAGCCGCACTT
AGCCGTACTTGGTC
C
T
ViewViewViewViewViewView%
ESR2_013c G1730A VIC
FAM
AGGTCACAGGCTGAA
TCACAAGCTGAAGC
C
T
ViewViewViewViewViewView%
ESR2_014c rs944459 VIC
FAM
TAAGTACGCAATTGC
TAAGTATGCAATTGCC
C
T
ViewViewViewViewViewView%
FSHB_001c rs601681 VIC
FAM
CTTTCATTGCATTTTATC
TTCATTGCGTTTTATC
T
C
View View ViewView%
FSHB_003c rs6169 VIC
FAM
TCTCACTGTTTCGTATACC
TCACTGTTTCATATACC
C
T
View View ViewView%
FSHB_005c rs1782508 VIC
FAM
ATGGGCTGGATTTT
TGGGCTCGATTTT
G
C
View View ViewView%
GNRH1_101c rs6185 VIC
FAM
CTGACTTCGTGCGTGG
TGACTTGGTGCGTGGA
G
C
View ViewViewViewView%
GNRH1_DOCK5_001c rs2709618 VIC
FAM
CTCCCCATCGTTGCAG
CCCCGTCGTTGCAG
A
G
View ViewViewViewView%
GNRH1_KCTD9_001c rs1812594 VIC
FAM
CCACTGCACATGTC
ACCACTACACATGTC
C
T
View ViewViewViewView%
GNRHR_101c rs4986942 VIC
FAM
TTTGCTGTTGCTTTT
TTGCTGTTACTTTTC
G
A
View ViewViewViewView%
GNRHR_102c rs10031252 VIC
FAM
CTCCCACCACAACCT
CCTCCCACCTCAACCT
A
T
View ViewViewViewView%
GNRHR_103c rs13138607 VIC
FAM
TTTTACCTACATCAAAACT
CCTACGTCAAAACT
A
G
View ViewViewViewView%
GNRHR_104c rs1843593 VIC
FAM
CTATTTGATGGCCAGCTAA
ACTATTTGATGACCAGCTAA
C
T
View ViewViewViewView%
GNRHR_105c rs2630488 VIC
FAM
TCCTCACGGTATAGACT
CCTCACGGTGTAGACT
A
G
View ViewViewViewView%
GNRHR_106c rs3796718 VIC
FAM
CCTGAGTAAGAAATACGGACAA
CCTGAGTAAGAAATACAGACAA
C
T
View ViewViewViewView%
GNRHR_107c rs3822196 VIC
FAM
CATTATTTATCATCATCAACATT
TTTATCATCGTCAACATT
A
G
View ViewViewViewView%
HD17B1_001c rs605059 VIC
FAM
CACCGCACCGCGC
CGCACTGCGCCCG
G
A
ViewViewViewViewViewView%
HD17B1_005c rs598126 VIC
FAM
CAGACATACAGAGAAT
CATACGGAGAATGAA
A
G
ViewViewViewViewViewView%
HD17B1_006c rs2010750 VIC
FAM
AAGGCAGGTGGATC
CCAAGGCGGGTGG
T
C
ViewViewViewViewViewView%
HD17B1_009c rs676387 VIC
FAM
TGGTTATCCCCAGCGCT
TGGTTATCACCAGCGCT
C
A
ViewViewViewViewViewView%
HSD17B2_004c CV411254 VIC
FAM
CCCCTTTCGACTGAGC
CCCCTTTCAACTGAGC
C
T
View View ViewView%
HSD17B2_015c rs2042429 VIC
FAM
ATCTTTGGCAAAATTAATGTA
TTTGGCAAAATCAATGTA
T
C
View View ViewView%
HSD17B2_018c rs2955163 VIC
FAM
CTTCTTGCCTTCAGAGAG
CTTCTTGCCTTGAGAGAG
G
C
View View ViewView%
HSD17B2_021c rs996752 VIC
FAM
CTATGACAGTGCTCTGC
ACTATGACAATGCTCTGC
G
A
View View ViewView%
HSD17B2_023c rs2966245 VIC
FAM
CTCAGTTAATCAGTGAAGAA
CTCAGTTAATCAATGAAGAA
G
A
View View ViewView%
HSD17B2_024c rs2955162 VIC
FAM
CCTGTCTTCGTAGGCTG
CTGTCTTCGTGGGCTG
T
C
View   ViewView%
HSD17B2_025c rs4889459 VIC
FAM
TGTGGTTGTTTAAAAGTGTGTA
TGTGGTTGTTTAAAAGTATGTA
C
T
View View ViewView%
IGF1_001c CV11752586 VIC
FAM
CAAACATCATAGACATAGAA
AAACATCATAGGCATAGAA
A
G
View ViewViewViewView%
IGF1_002c rs1019731 VIC
FAM
CTGGTCAAATTTAG
CTGGTCAAAGTTAG
A
C
View ViewViewViewView%
IGF1_004c rs2195239 VIC
FAM
ATAGGAAGCAACATGC
ATAGGAAGGAACATGC
C
G
View ViewViewViewView%
IGF1_006c CV346219 VIC
FAM
CATCGTACACTACTCCAC
TCGTACACTGCTCCAC
A
G
View ViewViewViewView%
IGF1_007c rs2373722 VIC
FAM
AGCTCCTAGATTCCT
CTCCTGGATTCCT
A
G
View ViewViewViewView%
IGF1_010c rs1549593 VIC
FAM
CATTTATTTTTCATTGTTTTTC
CATTTATTTTTCATTTTTTTTC
G
T
View ViewViewViewView%
IGF1_011c rs1520220 VIC
FAM
CCTTAGTACTTTTCCCAAACC
CTTAGTACTTTTGCCAAACC
C
G
View ViewViewViewView%
IGF1_014c rs7965399 VIC
FAM
ACTCATCAACGTGTTCTA
TTTACTCATCAACATGTTCTA
C
T
View ViewViewViewView%
IGF1_016c rs35767 VIC
FAM
CCCTGAGAGTCATGTGGAAA
CCTGAGAGTCATGCGGAAA
A
G
View ViewViewViewView%
Igf1_019c CV2801104 VIC
FAM
TCTTACATACTGAAACATG
CTTACATACTCAAACATG
G
C
View ViewViewViewView%
IGF1_022c rs2946834 VIC
FAM
CACATTATTGGATACATTG
ACACATTATTGAATACATTG
G
A
View ViewViewViewView%
IGF1_027c rs4764876 VIC
FAM
ACTGACACTCCCATCTG
CTGACACTGCCATCTG
C
G
View ViewViewViewView%
IGF1_028c rs4764695 VIC
FAM
CTCTGAATCAGATAGTTG
CTCTGAATCAGGTAGTTG
A
G
View ViewViewViewView%
IGF1_030c rs1996656 VIC
FAM
CTGTACAGGAACTGCA
CTGTACAGGGACTGCA
A
G
View ViewViewViewView%
IGFBP1_001c rs4619 VIC
FAM
CTGCCAGATATATTT
TGCCAGATGTATTTA
A
G
View ViewViewViewView%
IGFBP1_003c rs2201638 VIC
FAM
ACACAGAAGTACATAGATAG
CACAGAAGTACGTAGATAG
A
G
View ViewViewViewView%
IGFBP1_004c rs1065780 VIC
FAM
ATTGTTTTCTGCGTTTGAGA
ATTGTTTTCTGCATTTGAGA
G
A
View  ViewViewView%
IGFBP1_009c rs1553009 VIC
FAM
CAACAATGAGGTATGAACTA
CAATGAGGTGTGAACTA
A
G
View ViewViewViewView%
IGFBP1_010c cv395975 VIC
FAM
CTGGCCTTAGGCCTG
CTGGCCTTACGCCTG
C
G
View ViewViewViewView%
IGFBP1_011c rs1908751 VIC
FAM
CACATTCCGAAAGAA
CACATTCCAAAAGAA
C
T
View ViewViewViewView%
IGFBP1_012c SEQ_5 VIC
FAM
AAGGGTAGACGCACCAG
AAGGGTAGACACACCAG
C
T
View ViewViewViewView%
IGFBP1_015c CV395979 VIC
FAM
CTTATGAGGTAAGTATAATTGTA
TTATGAGGTAAGTATGATTGTA
A
G
View ViewViewViewView%
IGFBP3_003c rs2270628 VIC
FAM
CTATGTGAGTGTAGGTAATGT
TGTGAGTGTAGATAATGT
C
T
View ViewViewViewView%
IGFBP3_004c rs6670 VIC
FAM
CACAGTTGTATCATATAGCA
CAGTTGTATCAAATAGCA
T
A
View ViewViewViewView%
IGFBP3_005c rs2453839 VIC
FAM
CTTTGTTTGAAAACATGAGTTG
TTGTTTGAAAACGTGAGTTG
T
C
View ViewViewViewView%
IGFBP3_007c rs3110697 VIC
FAM
TGTGGCCACTACTATGA
TGGCCACTGCTATGA
A
G
View ViewViewViewView%
IGFBP3_010c rs2132570 VIC
FAM
AACAATGGAGTGCCCCG
AATGGAGGGCCCCG
T
G
View ViewViewViewView%
IGFBP3_011c rs2960436 VIC
FAM
CTGGGAGCCTTATGATG
TGGGAGCCTTGTGATG
A
G
View ViewViewViewView%
IGFBP3_013c rs2854744 VIC
FAM
TCCTCGTGCTCACGCC
CTCGTGCGCACGCC
T
G
View ViewViewViewView%
IGFBP3_014c rs2854746 VIC
FAM
AAGCCCGCCGAGCT
CAAGCCCCCCGAGCT
G
C
View ViewViewViewView%
PGR_004c rs1042838 VIC
FAM
ACAGCCAGTGGGCGT
ACAGCCATTGGGCGT
C
A
ViewViewViewViewViewView%
PGR_009c PGR_331 VIC
FAM
CGGCTCCTTTATC
CGGCTCTTTTATCTC
C
T
ViewViewViewViewViewView%
PGR_010c rs568157 VIC
FAM
TCAGAGGAGATTCTAC
CAGAGGAGGTTCTAC
A
G
ViewViewViewViewViewView%
PGR_011c rs474320 VIC
FAM
TATACCATGACAAACTT
ATACCATGTCAAACTT
T
A
ViewViewViewViewViewView%
PGR_012c rs499590 VIC
FAM
TGCACTTAATCATGCATCT
CACTTAATCGTGCATCT
T
C
ViewViewViewViewViewView%
PGR_013c rs529359 VIC
FAM
CCATTTCCTAAGTGTATTAA
CATTTCCTAAGCGTATTAA
T
C
ViewViewViewViewViewView%
PGR_016c rs613120 VIC
FAM
TACTTCGGTAAAGACTG
CTTCGGTAGAGACTG
A
G
ViewViewViewViewViewView%
PGR_017c rs543215 VIC
FAM
TCTTTGGACTAGAATCT
CTTTGGACTGGAATCT
A
G
ViewViewViewViewViewView%
PGR_018c rs572483 VIC
FAM
CATAACATTGTGATTCTACA
CATAACATTGTGACTCTACA
T
C
ViewViewViewViewViewView%
PGR_019c rs601040 VIC
FAM
CTTCTCCTCAGTCCAAC
TTCTCCTCGGTCCAAC
A
G
ViewViewViewViewViewView%
PGR_020c rs516693 VIC
FAM
CTTTGCCGTTTAGGC
CTTTGCCATTTAGGC
C
T
ViewViewViewViewViewView%
PGR_024c rs660541 VIC
FAM
CAGGCAAAGGCTACT
AGGCAAGGGCTACT
A
G
ViewViewViewViewViewView%
PGR_025c rs561650 VIC
FAM
ACCAAAGAATTGACTTATT
AAACCAAAGAATTAACTTATT
C
T
ViewViewViewViewViewView%
PGR_026c rs608995 VIC
FAM
CATGACTTAGTGAAGTAAG
TTTCATGACTTAGTGTAGTAAG
A
T
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PGR_028c rs1870019 VIC
FAM
CAAGCGAAAAACATG
AAGCGAAAAGCATG
A
G
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PGR_029c rs3740753 VIC
FAM
CGCGGAGTTCACCCT
CGCGGACTTCACCCT
C
G
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PGR_030c rs565186 VIC
FAM
TTGCACAGATAAATAG
TTGCACAGATGAATAG
T
C
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PGR_031c rs481775 VIC
FAM
TTTACATACTTTACAAATATCAGC
ACATACTTTACAAGTATCAGC
A
G
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PGR_101c rs508533 VIC
FAM
ATTCCTTATATGTGGTGTGCC
ATTCCTTATATGTTGTGTGCC
G
T
View View ViewView% Assay by Design C__3182859_10   
PGR_102c rs559700 VIC
FAM
CTCTTTTTTCCCCAATAAA
CTCTTTTTTTCCCAATAAA
C
T
View View ViewView% Assay by Design C__3182857_10   
PGR_103c rs545835 VIC
FAM
CAAAAACCAAAGAAATC
AAAACCAGAGAAATC
A
G
View View ViewView% Assay by Design C___539515_10   
PGR_104c rs473409 VIC
FAM
ATGTTCTTTTCAGTAAAATG
ATGTTCTTTTCATTAAAATG
G
T
View View ViewView% Assay by Design C__3182850_10   
PGR_105c rs1824125 VIC
FAM
TTCTTTCTCCAGTTCCTCA
CTTTCTCCAGGTCCTCA
A
C
View View ViewView% Assay by Design C_12034906_10   
PGR_106c rs1545611 VIC
FAM
TTCCCACTCAGAAAT
CTTTCCCGCTCAGAA
A
G
View   ViewView% Assay by Design C__7493677_10   
PGR_107c rs481883 VIC
FAM
AGCAAAGCAAAGAGT
AGCAAACCAAAGAGT
C
G
View View ViewView% Assay by Design C__2998472_10   
PGR_108c rs477151 VIC
FAM
TCATTTGCTTTATATGCATTT
ATTTGCTTTATGTGCATTT
A
G
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PGR_109c rs529216 VIC
FAM
CTCTTGGTCTCAAGTTA
CTTGGGCTCAAGTTA
A
C
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POMC_001c rs10202360 VIC
FAM
CAGCATGGAACACGT
AGCATGGAAAACGT
C
A
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POMC_002c rs7566506 VIC
FAM
CAGCCCTGCCCTC
CAGCCATGCCCTC
C
A
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POMC_003c rs1042571 VIC
FAM
TTGCTCTCCCCTGCCCT
TTGCTCTTCCCTGCCCT
G
A
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POMC_004c G4-SN-3PS3-A VIC
FAM
AAGCAACTGCGTAGAGTA
AAGCAACTGCCTAGAGTA
G
C
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POMC_005c rs1866146 VIC
FAM
ATAAGAAGCAGATCGG
TAAGAGGCAGATCGG
A
G
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POMC_006c rs13002622 VIC
FAM
TGTTCAGTTTCCTTATAAAC
TTCAGTTTCCTCATAAAC
T
C
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VDR_001c rs2228570 VIC
FAM
ATTGCCTCCATCCCTGT
TGCCTCCGTCCCTGT
A
G
View     % ABI Assay ID A-019689 ABI order # 185276230
VDR_002c rs1544410 VIC
FAM
CTGCGCATTCCCA
CCTGCACATTCCCA
C
T
View     % ABI Assay ID - VDRBSM1 ABI order # 185189644